• Disease Overview
  • Synonyms
  • Signs & Symptoms
  • Causes
  • Affected Populations
  • Disorders with Similar Symptoms
  • Diagnosis
  • Standard Therapies
  • Clinical Trials and Studies
  • References
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Early-Onset Progressive Diffuse Brain Atrophy-Microcephaly-Muscle Weakness-Optic Atrophy Syndrome (PEBAT)

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Last updated: 10/7/2025
Years published: 2025


Acknowledgment

NORD gratefully acknowledges Samah Akhter, MS, LCGC, Genetic Counselor, and Gioconda Alyea, MD (FMG), MS, National Organization for Rare Disorders, for the preparation of this report.


Disease Overview

Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome (PEBAT) is a rare and severe neurodegenerative condition that begins during the early stages of life, especially infancy.1

The characteristic features of this condition are severe developmental delays, or loss of skills (developmental regression), seizures (usually with onset in infancy), and progressive loss of brain volume, accompanied by a thin corpus callosum (nerve fibers connecting the left and right sides of the brain). Other features include decreased head size (microcephaly), low muscle tone (hypotonia), optic nerve damage (optic atrophy) resulting in loss of vision and some skeletal abnormalities such as multiple joint contractures (arthrogryposis), hip dislocation, abnormal shape of the head and an abnormal lateral curvature of the spine (scoliosis).1,2

PEBAT is caused by disease-causing changes (pathogenic variants) in the TBCD gene, which provides instructions for making the tubulin folding protein TBCD. The inheritance pattern of this condition is autosomal recessive.1,3

Diagnosis is based on a combination of clinical assessment, neuroimaging (MRI of the brain) and genetic testing. There is no cure for this condition, and treatment typically involves a symptom-based approach to enhance quality of life.1

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Synonyms

  • TBCD-related encephalopathy
  • TBCD disorder
  • encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum
  • encephalopathy, progressive, early-onset, with brain atrophy and thin corpus callosum; PEBAT
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Signs & Symptoms

PEBAT can cause a wide spectrum of clinical symptoms with varying levels of progression and severity, even within members of the same family. Symptoms can develop in a newborn or later in infancy. Numerous symptoms have been reported for this condition. Not all of them are seen in a single person, and they can differ from one person to another. The most common findings are developmental delays and seizures.2,3,4

The signs and symptoms that have been reported include:1-5

  • Developmental delay:
    • Loss of previously acquired skills or abilities in a child (developmental regression)
    • Absent or limited speech development
    • Intellectual disability which is typically severe
    • Brain damage affecting thinking and functioning (encephalopathy)
  • Neurodevelopmental features:
    • Absent or poor head control
    • Feeding difficulties (with or without chronic constipation)
    • Mild to severe low muscle tone (hypotonia) in almost all infants
    • Difficulty growing and gaining weight
    • Respiratory difficulties
      • Low muscle tone and brain changes together can cause slow breathing and poor airway protection
    • Rapid involuntary muscle twitches on the tongue surface (tongue fasciculations)
  • Epilepsy (seen in most affected people) developing in the first months of life which can include:
    • Sudden jerks or stiffening of the body (infantile spasms, under 1 year old)
    • Other seizure types
      • Bilateral limb stiffening and rigidity (generalized tonic seizure)
      • Stiffening (tonic) followed by jerking (clonic) movements on both sides of the body (bilateral tonic clonic seizure)
  • Cranial features:
    • Decreased head size (microcephaly) which is present at birth and can be progressive after birth
    • Head that becomes flattened on one side (plagiocephaly)
  • Facial features (less typical):
    • Sparse eyebrows
    • Slanting eyes (upslanting palpebral fissures)
    • Increased distance between eyes (hypertelorism)
    • Small jaw (micrognathia)
    • Widely spaced teeth
  • Vision problems (hallmark feature in more than half of affected people):
    • Thinning of optic nerves (optic atrophy) resulting in vision loss
      • Poor visual tracking
      • Lack of eye contact or visual responses
      • Lack of visual attention
  • Musculoskeletal features:
    • Multiple joint contractures due to stiff joints and limited movement (arthrogryposis)
    • Muscle wastage/shrinkage (muscle atrophy)
    • Absence of deep tendon muscles (areflexia)
    • Muscle stiffness/tightness (spasticity) seen in most people
    • Severe muscle stiffness and weakness affecting all four limbs (spastic tetraplegia)
    • Curved spine (scoliosis)
    • Hip dislocation
  • Behavioral problems:
    • Aggressiveness
    • Hyperactivity
    • Agitation
  • Brain features (visualized through magnetic resonance imaging (MRI):
    • Widespread progressive loss of brain tissue (cerebral atrophy) — considered a hallmark feature of this disease
    • Shrinkage or loss of brain cells in the outer layer of the brain (cerebral cortical atrophy)
    • Too little or poor formation of myelin (protective covering of nerves) in the brain (cerebral hypomyelination)
    • Thinning of the band of nerve fibers that connects the right and left sides of the brain (hypoplasia of the corpus callosum) seen in nearly all affected people, many small folds in the brain, affecting development and function (polymicrogyria)
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Causes

PEBAT is caused by disease-causing changes (pathogenic genetic variants) in the TBCD (tubulin folding cofactor D) gene.1 The TBCD gene is responsible for the production of the TBCD (tubulin cofactor) protein involved in the correct assembly and shaping of microtubules.6

Microtubules are structures giving shape and stability to the cell and are crucial for processes like cell division and nerve cell (neuron) functions, such as sending signals between neurons and building brain connections.7

Disease-causing TBCD variants affect TBCD protein stability and function, resulting in disturbed microtubule structure and functioning.1 When microtubules do not form and hold shape and structure properly, the neurons cannot maintain their structure or function. Hence, their ability to make connections and send signals gets disrupted leading to brain abnormalities, developmental delays, wasting of brain tissue and other related symptoms as seen in PEBAT.4-8

Inheritance

The inheritance pattern for PEBAT is autosomal recessive.1,2,3 Recessive genetic disorders occur when an individual inherits a disease-causing gene variant from each parent. If an individual receives one normal gene and one disease-causing gene variant, the person will be a carrier for the disease but usually will not show symptoms. The risk for two carrier parents to both pass the gene variant and have an affected child is 25% with each pregnancy. The risk of having a child who is a carrier like the parents is 50% with each pregnancy. The chance for a child to receive normal genes from both parents is 25%. The risk is the same for males and females.

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Affected populations

PEBAT is a rare condition with a prevalence of about <1/1,000,000. As of 2025, approximately 39 cases have been reported in the medical literature.1 Patients have been reported from different parts of the world and there does not appear to be a specific geographical or ethnic limitation; however, reports are sparse. One study reported a founder variant (a genetic change that started in a small group of ancestors and is passed down through generations in that population) in the Faroe Islands, located between Iceland and Norway in the North Atlantic Sea. The study showed that 2.6% of the Faroese population are carriers of a gene variant for PEBAT.8 Outside of these islands, the carrier frequency in the general population is extremely low, as no large population hotspots have been identified yet.

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Diagnosis

The diagnosis of PEBAT is based on a combination of typical signs and symptoms, medical evaluation, brain imaging and genetic testing.1,4

At present, there are no biomarkers (laboratory tests that directly confirm the disease). Instead, doctors look for characteristic clinical features together with findings on magnetic resonance imaging (MRI). MRI is a safe technique that uses magnets and radio waves to produce detailed pictures of the brain. In PEBAT and other tubulin-related disorders (conditions caused by problems in proteins important for brain cell structure), the MRI often shows changes that raise suspicion for the condition.

Once PEBAT is suspected, genetic testing is essential to confirm the diagnosis. This testing looks for variants in the TBCD gene. Testing can be done in several ways:1,4

  • Single gene testing which examines only the TBCD gene
  • Targeted gene panel testing which checks a group of genes that are linked to neurodegenerative conditions (diseases where the nervous system gradually deteriorates)
  • Whole exome sequencing, a broader approach that looks at nearly all of a person’s genes

If disease-causing variants in the TBCD gene are found in a family, doctors can offer carrier screening. This type of testing checks if relatives carry the gene variant, which can help with understanding their own health risks and with family planning.

For families who wish to have children in the future, doctors can also discuss options such as prenatal genetic diagnosis (testing during pregnancy) or preimplantation genetic diagnosis (testing embryos created by in-vitro fertilization before pregnancy begins).1,4

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Standard Therapies

Although there is currently no treatment for PEBAT, an early diagnosis can provide families with more personalized counseling regarding prognosis and the likelihood of recurrence in future pregnancies.⁴ At present, there is no cure or gene therapy available. Care is therefore focused on symptom management through a multidisciplinary approach, with the goal of improving quality of life and reducing the impact of symptoms. The type of care needed depends on the severity of the condition and the specific symptoms the person has.¹

Seizures are a common concern, and children are usually referred to a neurologist for specialized care. Anti-seizure or anti-epileptic medications may be prescribed to help control these episodes. Nutritional support is also important and may involve referrals to specialists in nutrition and dietetics. Children are often evaluated for swallowing difficulties, and in some cases a gastrostomy tube (G-tube) may be recommended to support safe feeding. Management of constipation and regular monitoring of growth are also key aspects of nutritional care.

Respiratory support may be needed for some children, with referrals to a pulmonologist for further evaluation. Slow or shallow breathing (hypoventilation) may require close monitoring. Treatments might include medications or equipment to clear the airways, and in some children oxygen or breathing machines are used.

Therapies such as physical, occupational, speech and behavioral therapy play an essential role in care. These therapies can help manage stiff joints and muscles, maintain mobility and provide alternative methods of communication when speech is affected. Orthopedic evaluations may be necessary to address skeletal differences. Physical aids can assist with movement, while medications may be used to reduce muscle stiffness. In some people, surgical interventions are considered for musculoskeletal difficulties.

Because PEBAT can also affect vision and hearing, regular evaluations are important. Doctors may monitor for changes such as optic nerve damage.

Families are encouraged to access supportive and palliative care services to help manage complex needs and improve overall quality of life. Genetic counseling is strongly recommended for family planning, as it can help relatives understand their risk of carrying a gene variant for the condition. Finally, connecting with community resources and patient support groups can provide valuable emotional support and practical guidance for families living with PEBAT.

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Clinical Trials and Studies

Information on current clinical trials is posted on the Internet at https://clinicaltrials.gov/

All studies receiving U.S. Government funding, and some supported by private industry, are posted on this government web site.

For information about clinical trials being conducted at the NIH Clinical Center in Bethesda, MD, contact the NIH Patient Recruitment Office:

Tollfree: (800) 411-1222
TTY: (866) 411-1010
Email: [email protected]

Some current clinical trials also are posted on the following page on the NORD website: https://rarediseases.org/living-with-a-rare-disease/find-clinical-trials/

For information about clinical trials sponsored by private sources, contact: http://www.centerwatch.com/

For information about clinical trials conducted in Europe, contact: https://www.clinicaltrialsregister.eu/ 

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References

  1. Orphanet: Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome. March 2021. https://www.orpha.net/en/disease/detail/496641 Accessed Sept 18, 2025.
  2. Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome. Genetic and Rare Diseases Information Center (GARD) https://rarediseases.info.nih.gov/diseases/17911/early-onset-progressive-diffuse-brain-atrophy-microcephaly-muscle-weakness-optic-atrophy-syndrome Accessed Sept 18, 2025.
  3. Online Mendelian Inheritance in Man (OMIM). Johns Hopkins University, Baltimore, MD. MIM Number: 617193, Encephalopathy, Early-Onset, with Brain Atrophy and Thin Corpus Callosum; PEBAT. Updated 11/16/2016. https://www.omim.org/entry/617193 Accessed September 18, 2025.
  4. Ocampo-Chih L, Martinez-Agosto JA, Perez-Torres CJ, et al. Early-onset progressive encephalopathy with brain atrophy and thin corpus callosum (PEBAT): Case series and literature review. Pediatric Neurology. 2023;143:28-34. doi:10.1016/j.pediatrneurol.2022.08.010
  5. Miyake N, Fukai R, Ohba C, et al. Biallelic TBCD Mutations Cause Early-Onset Neurodegenerative Encephalopathy. Am J Hum Genet. 2016;99(4):950-961. doi:10.1016/j.ajhg.2016.08.005 Edvardson S, Tian G, Cullen H, Vanyai H, Ngo L, Bhat S, Aran A, Daana M, Da’amseh N, Abu-Libdeh B, Cowan NJ, Heng JI, Elpeleg O. Infantile neurodegenerative disorder associated with mutations in TBCD, an essential gene in the tubulin heterodimer assembly pathway. Hum Mol Genet. 2016 Nov 1;25(21):4635-4648. doi: 10.1093/hmg/ddw292. PMID: 28158450; PMCID: PMC6459059.
  6. Edvardson S, Tian G, Cullen H, Vanyai H, Ngo L, Bhat S, Aran A, Daana M, Da’amseh N, Abu-Libdeh B, Cowan NJ, Heng JI, Elpeleg O. Infantile neurodegenerative disorder associated with mutations in TBCD, an essential gene in the tubulin heterodimer assembly pathway. Hum Mol Genet. 2016 Nov 1;25(21):4635-4648. doi: 10.1093/hmg/ddw292. PMID: 28158450; PMCID: PMC6459059.
  7. Flex E, Niceta M, Cecchetti S, et al. Mutations in TBCD, encoding the tubulin folding cofactor D, are responsible for an autosomal recessive neurodegenerative disorder. Am J Hum Genet. 2016;99(3):790-795. doi:10.1016/j.ajhg.2016.07.006.
  8. Grønborg S, Risom L, Ek J, et al. A Faroese founder variant in TBCD causes early onset, progressive encephalopathy with a homogenous clinical course. Eur J Hum Genet. 2018;26(10):1512-1520. doi:10.1038/s41431-018-0204-5
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